generated from john/python-template
V2 implementation step 1
This commit is contained in:
+119
-47
@@ -1,27 +1,50 @@
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"""SQLModel domain models for the transcription system.
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Core V1 lifecycle:
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Document -> one-to-many -> Source
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Document -> one-to-many -> Job
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Source -> one-to-one? -> Revision (optional)
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"""
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"""SQLModel domain models for the V2 transcription system."""
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from datetime import UTC
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from datetime import date
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from datetime import datetime
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from enum import StrEnum
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from typing import Any
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from typing import Optional
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from uuid import UUID
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from uuid import uuid4
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from sqlalchemy import Column
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from sqlalchemy import JSON
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from sqlalchemy import UniqueConstraint
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from sqlalchemy.dialects.postgresql import JSONB
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from sqlalchemy.types import TypeDecorator
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from sqlmodel import Field
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from sqlmodel import Relationship
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from sqlmodel import SQLModel
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class JSONBCompat(TypeDecorator):
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"""JSONB for PostgreSQL and JSON for SQLite/testing backends."""
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impl = JSON
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def load_dialect_impl(self, dialect):
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if dialect.name == "postgresql":
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return dialect.type_descriptor(JSONB())
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return dialect.type_descriptor(JSON())
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class JobStatus(StrEnum):
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QUEUED = "queued"
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PROCESSING = "processing"
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COMPLETED = "completed"
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PARTIAL_SUCCESS = "partial_success"
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FAILED = "failed"
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class DocumentPersonRole(StrEnum):
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AUTHOR = "author"
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RECIPIENT = "recipient"
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class JobSourceStatus(StrEnum):
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PENDING = "pending"
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TRANSCRIBED = "transcribed"
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FAILED = "failed"
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@@ -31,34 +54,63 @@ class Document(SQLModel, table=True):
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id: UUID = Field(default_factory=uuid4, primary_key=True)
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name: str
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document_type: str | None = None
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document_date: date | None = None
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document_date_raw: str | None = None
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location_created: str | None = None
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notes: str | None = None
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archive_identifier: str | None = None
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created_at: datetime = Field(default_factory=lambda: datetime.now(UTC))
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updated_at: datetime = Field(default_factory=lambda: datetime.now(UTC))
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# Relationships
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jobs: list["Job"] = Relationship(back_populates="document")
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sources: list["Source"] = Relationship(back_populates="document")
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document_people: list["DocumentPerson"] = Relationship(back_populates="document")
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class Source(SQLModel, table=True):
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"""A document source (image or PDF)."""
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class Person(SQLModel, table=True):
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"""A historical person linked to one or more documents."""
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id: UUID = Field(default_factory=uuid4, primary_key=True)
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full_name: str
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display_name: str | None = None
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maiden_name: str | None = None
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birth_date: date | None = None
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birth_date_raw: str | None = None
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birth_place: str | None = None
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death_date: date | None = None
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death_date_raw: str | None = None
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death_place: str | None = None
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biography: str | None = None
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portrait_path: str | None = None
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metadata_: dict[str, Any] | None = Field(
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default=None,
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sa_column=Column("metadata", JSONBCompat(), nullable=True),
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)
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created_at: datetime = Field(default_factory=lambda: datetime.now(UTC))
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updated_at: datetime = Field(default_factory=lambda: datetime.now(UTC))
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document_people: list["DocumentPerson"] = Relationship(back_populates="person")
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class DocumentPerson(SQLModel, table=True):
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"""Associates documents with people in a given role."""
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__tablename__ = "document_person"
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id: UUID = Field(default_factory=uuid4, primary_key=True)
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document_id: UUID = Field(foreign_key="document.id")
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job_id: UUID = Field(foreign_key="job.id")
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upload_name: str
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"""The filename of the source that was uploaded for transcription."""
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filename: str
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"""The system generated unique source name."""
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file_path: str
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"""The location where the sources are stored on the local filesystem."""
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date_uploaded: datetime = Field(default_factory=lambda: datetime.now(UTC))
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person_id: UUID = Field(foreign_key="person.id")
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role: DocumentPersonRole = Field(default=DocumentPersonRole.AUTHOR)
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created_at: datetime = Field(default_factory=lambda: datetime.now(UTC))
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# Relationships
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document: Optional["Document"] = Relationship(back_populates="sources")
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job: Optional["Job"] = Relationship(back_populates="sources")
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revision: Optional["Revision"] = Relationship(
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back_populates="source",
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sa_relationship_kwargs={"uselist": False},
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__table_args__ = (
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UniqueConstraint("document_id", "person_id", "role", name="uq_document_person_role"),
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)
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document: Optional["Document"] = Relationship(back_populates="document_people")
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person: Optional["Person"] = Relationship(back_populates="document_people")
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class Job(SQLModel, table=True):
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"""A transcription job tied to a single document."""
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@@ -70,41 +122,61 @@ class Job(SQLModel, table=True):
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date_created: datetime = Field(default_factory=lambda: datetime.now(UTC))
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date_updated: datetime = Field(default_factory=lambda: datetime.now(UTC))
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provider: str | None = None
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"""Name of the transcription provider used to generate this transcript."""
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model: str | None = None
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"""Model identifier used to generate this transcript."""
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prompt_name: str | None = None
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"""Name of the prompt used to generate this transcript."""
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text: str | None = None
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"""The transcribed text. This may be None if the job failed or is still in progress."""
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error_detail: str | None = None
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"""Details of any error that occurred during transcription."""
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# Relationships
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document: Optional["Document"] = Relationship(back_populates="jobs")
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sources: list["Source"] = Relationship(back_populates="job")
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job_sources: list["JobSource"] = Relationship(back_populates="job")
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@property
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def filename(self) -> str:
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"""Return the filename of the associated source, when available."""
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if not self.sources:
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if not self.job_sources:
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return "unknown"
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return self.sources[0].filename
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return self.job_sources[0].source.filename if self.job_sources[0].source is not None else "unknown"
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class Revision(SQLModel, table=True):
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"""A revision of a transcription text."""
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class Source(SQLModel, table=True):
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"""A document source image or PDF page."""
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id: UUID = Field(default_factory=uuid4, primary_key=True)
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document_id: UUID = Field(foreign_key="document.id")
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page_number: int = Field(ge=1)
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upload_name: str
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filename: str
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file_path: str
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raw_transcription: str | None = None
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revised_text: str | None = None
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date_uploaded: datetime = Field(default_factory=lambda: datetime.now(UTC))
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date_revised: datetime | None = None
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document: Optional["Document"] = Relationship(back_populates="sources")
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job_sources: list["JobSource"] = Relationship(back_populates="source")
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class JobSource(SQLModel, table=True):
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"""A single AI execution record for one source page."""
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__tablename__ = "job_source"
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id: UUID = Field(default_factory=uuid4, primary_key=True)
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job_id: UUID = Field(foreign_key="job.id")
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source_id: UUID = Field(foreign_key="source.id")
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"""ID for the associated source."""
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revision: int = Field(default=1, ge=1)
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"""Revision number of this transcription revision, starting at 1."""
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text: str
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"""The revised text."""
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status: JobSourceStatus = Field(default=JobSourceStatus.PENDING)
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raw_transcription: str | None = None
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ai_metadata: dict[str, Any] | None = Field(default=None, sa_column=Column(JSONBCompat(), nullable=True))
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raw_api_response: dict[str, Any] | None = Field(default=None, sa_column=Column(JSONBCompat(), nullable=True))
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error_detail: str | None = None
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executed_at: datetime = Field(default_factory=lambda: datetime.now(UTC))
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job: Optional["Job"] = Relationship(back_populates="job_sources")
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source: Optional["Source"] = Relationship(back_populates="job_sources")
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class Revision(SQLModel):
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"""Temporary compatibility shim for older service imports during the V2 migration."""
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id: UUID = Field(default_factory=uuid4, primary_key=True)
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source_id: UUID = Field(default_factory=uuid4)
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text: str | None = None
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date_created: datetime = Field(default_factory=lambda: datetime.now(UTC))
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__table_args__ = (UniqueConstraint("source_id", name="uq_revision_source_id"),)
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# Relationships
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source: Optional["Source"] = Relationship(back_populates="revision")
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@@ -2,9 +2,6 @@ from __future__ import annotations
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import logging
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from sqlalchemy import inspect
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from sqlalchemy import text
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from sqlalchemy.engine import Connection
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from sqlalchemy.ext.asyncio import AsyncEngine
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from sqlmodel import SQLModel
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from sqlmodel import select
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@@ -25,7 +22,6 @@ async def create_all(*, engine: AsyncEngine | None = None) -> None:
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active_engine = engine or resolve_engine()
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async with active_engine.begin() as connection:
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await connection.run_sync(SQLModel.metadata.create_all)
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await connection.run_sync(_ensure_sqlite_compat_columns)
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logger.debug("Database schema bootstrap complete for database_url=%s", active_engine.url)
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@@ -38,38 +34,3 @@ async def get_next_queued_job(*, session: AsyncSession) -> Job | None:
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.limit(1)
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) # fmt: skip
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return result.first()
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def _ensure_sqlite_compat_columns(connection: Connection) -> None:
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"""Apply lightweight dev/test SQLite compatibility column patches.
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This keeps local bootstrap resilient when models evolve but no full
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migration tooling is in place yet.
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"""
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if connection.engine.url.get_backend_name() != "sqlite":
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return
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inspector = inspect(connection)
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table_names = set(inspector.get_table_names())
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if "job" in table_names:
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job_columns = {column["name"] for column in inspector.get_columns("job")}
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if "retry_count" not in job_columns:
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connection.execute(text("ALTER TABLE job ADD COLUMN retry_count INTEGER NOT NULL DEFAULT 0"))
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logger.warning("Applied SQLite compatibility schema patch table=job column=retry_count default=0")
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if "revision" in table_names:
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revision_columns = {column["name"] for column in inspector.get_columns("revision")}
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if "source_id" in revision_columns:
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has_unique_source = False
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for index in inspector.get_indexes("revision"):
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if index.get("unique") and index.get("column_names") == ["source_id"]:
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has_unique_source = True
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break
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if not has_unique_source:
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connection.execute(
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text("CREATE UNIQUE INDEX IF NOT EXISTS ux_revision_source_id ON revision(source_id)")
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)
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logger.warning(
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"Applied SQLite compatibility schema patch table=revision unique_index=ux_revision_source_id"
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)
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+5
-2
@@ -1,4 +1,4 @@
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"""Tests for transcription.db runtime and schema bootstrap behavior."""
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"""Tests for the database runtime and V2 schema bootstrap behavior."""
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import pytest
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from sqlalchemy import inspect
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@@ -26,9 +26,12 @@ async def test_create_all_creates_expected_tables(tmp_path):
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table_names = set(await conn.run_sync(lambda c: inspect(c).get_table_names()))
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assert "document" in table_names
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assert "person" in table_names
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assert "document_person" in table_names
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assert "job" in table_names
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assert "source" in table_names
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assert "revision" in table_names
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assert "job_source" in table_names
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assert "revision" not in table_names
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finally:
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await dispose_database_runtime()
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+88
-48
@@ -1,19 +1,29 @@
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"""Tests for transcription.models — Document, Source, Job, Revision persistence and relationships."""
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"""Tests for the V2 SQLModel persistence layer and relationships."""
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from datetime import UTC
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from datetime import datetime
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from uuid import UUID
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import pytest
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from sqlalchemy.exc import IntegrityError
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from transcription.db.models import Document
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from transcription.db.models import DocumentPerson
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from transcription.db.models import DocumentPersonRole
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from transcription.db.models import Job
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from transcription.db.models import JobSource
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from transcription.db.models import JobSourceStatus
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from transcription.db.models import JobStatus
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from transcription.db.models import Revision
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from transcription.db.models import Person
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from transcription.db.models import Source
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def _make_document(**overrides) -> Document:
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defaults = {"name": "letter bundle"}
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defaults = {
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"name": "letter bundle",
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"document_type": "letter",
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"notes": "Family correspondence",
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}
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defaults.update(overrides)
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return Document(**defaults)
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@@ -26,6 +36,16 @@ def _persist_document(session) -> Document:
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return document
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def _persist_person(session, **overrides) -> Person:
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defaults = {"full_name": "Ada Lovelace"}
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defaults.update(overrides)
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person = Person(**defaults)
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session.add(person)
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session.commit()
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session.refresh(person)
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return person
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def _persist_job(session, document: Document) -> Job:
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job = Job(document_id=document.id)
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session.add(job)
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@@ -34,13 +54,14 @@ def _persist_job(session, document: Document) -> Job:
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return job
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def _persist_source(session, document: Document, job: Job, **overrides) -> Source:
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def _persist_source(session, document: Document, *, page_number: int = 1, **overrides) -> Source:
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defaults = {
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"document_id": document.id,
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"job_id": job.id,
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"page_number": page_number,
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"upload_name": "letter.jpg",
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"filename": "stored-letter.jpg",
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"file_path": "/uploads/stored-letter.jpg",
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"raw_transcription": "Original machine text",
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}
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defaults.update(overrides)
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source = Source(**defaults)
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@@ -50,6 +71,20 @@ def _persist_source(session, document: Document, job: Job, **overrides) -> Sourc
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return source
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def _persist_job_source(session, job: Job, source: Source, **overrides) -> JobSource:
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defaults = {
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"job_id": job.id,
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"source_id": source.id,
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"status": JobSourceStatus.PENDING,
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}
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defaults.update(overrides)
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job_source = JobSource(**defaults)
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session.add(job_source)
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session.commit()
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session.refresh(job_source)
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return job_source
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class TestDocumentModel:
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def test_can_be_persisted(self, session):
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document = _persist_document(session)
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@@ -60,6 +95,8 @@ class TestDocumentModel:
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def test_defaults_are_populated(self, session):
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document = _persist_document(session)
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assert isinstance(document.id, UUID)
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assert document.created_at is not None
|
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assert document.updated_at is not None
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class TestJobModel:
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@@ -78,7 +115,7 @@ class TestJobModel:
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assert job.date_created is not None
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assert job.date_updated is not None
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||||
|
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def test_transitions_to_transcribed(self, session):
|
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def test_transitions_to_completed(self, session):
|
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document = _persist_document(session)
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job = _persist_job(session, document)
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@@ -87,79 +124,82 @@ class TestJobModel:
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session.commit()
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session.refresh(job)
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job.status = JobStatus.TRANSCRIBED
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job.status = JobStatus.COMPLETED
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session.add(job)
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session.commit()
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session.refresh(job)
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assert job.status == JobStatus.TRANSCRIBED
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assert job.status == JobStatus.COMPLETED
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class TestSourceModel:
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def test_can_be_created_for_document_and_job(self, session):
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def test_can_be_created_for_document(self, session):
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document = _persist_document(session)
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job = _persist_job(session, document)
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source = _persist_source(session, document, job)
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source = _persist_source(session, document)
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fetched = session.get(Source, source.id)
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assert fetched is not None
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assert fetched.document_id == document.id
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assert fetched.job_id == job.id
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assert fetched.page_number == 1
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assert fetched.date_uploaded is not None
|
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|
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class TestRevisionModel:
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def test_revision_persists_for_source(self, session):
|
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def test_revised_text_is_supported(self, session):
|
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document = _persist_document(session)
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job = _persist_job(session, document)
|
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source = _persist_source(session, document, job)
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source = _persist_source(session, document, revised_text="Edited output")
|
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|
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revision = Revision(source_id=source.id, text="Edited revision text")
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session.add(revision)
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session.commit()
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session.refresh(revision)
|
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|
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fetched = session.get(Revision, revision.id)
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fetched = session.get(Source, source.id)
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assert fetched is not None
|
||||
assert fetched.text == "Edited revision text"
|
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assert fetched.date_created is not None
|
||||
assert fetched.revised_text == "Edited output"
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def test_source_id_is_unique(self, session):
|
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|
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class TestPersonAndDocumentPersonModel:
|
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def test_document_person_role_is_unique_per_document_person(self, session):
|
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document = _persist_document(session)
|
||||
job = _persist_job(session, document)
|
||||
source = _persist_source(session, document, job)
|
||||
person = _persist_person(session)
|
||||
|
||||
first = Revision(source_id=source.id, text="First")
|
||||
first = DocumentPerson(document_id=document.id, person_id=person.id, role=DocumentPersonRole.AUTHOR)
|
||||
session.add(first)
|
||||
session.commit()
|
||||
|
||||
duplicate = Revision(source_id=source.id, text="Duplicate")
|
||||
duplicate = DocumentPerson(document_id=document.id, person_id=person.id, role=DocumentPersonRole.AUTHOR)
|
||||
session.add(duplicate)
|
||||
with pytest.raises(IntegrityError):
|
||||
session.commit()
|
||||
|
||||
|
||||
class TestRelationships:
|
||||
def test_document_exposes_jobs_and_sources(self, session):
|
||||
class TestJobSourceModel:
|
||||
def test_job_source_persists_json_payloads(self, session):
|
||||
document = _persist_document(session)
|
||||
job = _persist_job(session, document)
|
||||
_persist_source(session, document, job)
|
||||
source = _persist_source(session, document)
|
||||
job_source = _persist_job_source(
|
||||
session,
|
||||
job,
|
||||
source,
|
||||
raw_transcription="Page transcript",
|
||||
ai_metadata={"confidence": 0.91, "boxes": [{"x": 1, "y": 2}]},
|
||||
raw_api_response={"provider": "test"},
|
||||
)
|
||||
|
||||
fetched = session.get(JobSource, job_source.id)
|
||||
assert fetched is not None
|
||||
assert fetched.status == JobSourceStatus.PENDING
|
||||
assert fetched.ai_metadata == {"confidence": 0.91, "boxes": [{"x": 1, "y": 2}]}
|
||||
assert fetched.raw_api_response == {"provider": "test"}
|
||||
|
||||
|
||||
class TestRelationships:
|
||||
def test_document_exposes_jobs_sources_and_people(self, session):
|
||||
document = _persist_document(session)
|
||||
_persist_job(session, document)
|
||||
_persist_source(session, document)
|
||||
person = _persist_person(session)
|
||||
|
||||
link = DocumentPerson(document_id=document.id, person_id=person.id, role=DocumentPersonRole.AUTHOR)
|
||||
session.add(link)
|
||||
session.commit()
|
||||
|
||||
session.refresh(document)
|
||||
assert len(document.jobs) == 1
|
||||
assert len(document.sources) == 1
|
||||
|
||||
def test_source_exposes_optional_single_revision(self, session):
|
||||
document = _persist_document(session)
|
||||
job = _persist_job(session, document)
|
||||
source = _persist_source(session, document, job)
|
||||
|
||||
assert source.revision is None
|
||||
|
||||
revision = Revision(source_id=source.id, text="Edited")
|
||||
session.add(revision)
|
||||
session.commit()
|
||||
|
||||
session.refresh(source)
|
||||
assert source.revision is not None
|
||||
assert source.revision.text == "Edited"
|
||||
assert len(document.document_people) == 1
|
||||
|
||||
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Reference in New Issue
Block a user